MEA Tools problem
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MEA Tools problem
Dear, I’m using
MEA tools extension of matlab for MEA data analysis. I first create the
variable “D” from a mcd file and save it in the workspace. Then, I use
the datastream summary function in display function and matlab return
“there is currently no MCRack
file open in your workspace, please choose a suitable file” whereas D
is open in the
workspace. Moreover when I try opening the mcd file directly from
datastream summary the following message appears :
" ??? Undefined function or variable 'datastrm'.
Error in ==> C:\MATLAB6p5\toolbox\meatools\mcssummaryctrl.m
On line 25 ==> evalin('base', ['global D; D=datastrm(''' fullfile(datapath, datafile) ''');']);
Error in ==> C:\MATLAB6p5\toolbox\meatools\dstream_sum_fig.m
On line 262 ==> mcssummaryctrl('showDinfo', 'dsfh', h0);
??? Error while evaluating uimenu Callback. "
Does anyone have a explanation or a solution to my problem? Thank you.
Here are the information of D delivered by array editor :
filename:
'test.mcd'
fid: -1
BitFlipRemoveFactor: 0
meatype: '8x8'
version: '2.4.9'
filesize: 187249
id: 0
DataType: ''
NChannels: 0
NChannels2: 55
ChannelNames: ''
ChannelNames2: {{55x1 cell}}
HardwareChannelNames: ''
HardwareChannelNames2: {{55x1 cell}}
MicrovoltsPerAD: 1
MicrovoltsPerAD2: 0.0114
MicrosecondsPerTick: 40
ZeroADValue: 2048
ZeroADValue2: 32768
ChannelID: 0
ChannelID2: {[55x1 double]}
HardwareChannelID: 0
HardwareChannelID2: {[55x1 double]}
sorterleft: [1x128 double]
sorterright: [1x128 double]
mea8x8ChannelNames: {1x64 cell}
total_window_ticks: 25000
offset_to_data: 0
recordingdate: 7.3407e+005
recordingStopDate: 7.3407e+005
sweepStartTime: 0
sweepStartPointer: 0
windowTicksPos: 0
triggerChannel: -1
spikeSize: 0
ticks_pre_event: 0
maxSpkPerSegmPerChanl: 0
nSpikesPerSegement: 0
nSpkPerSegPerChanl: 0
HeaderVersion: 10
fileaccess: 'ole'
MillisamplesPerSecond: 25000000
MillisamplesPerSecond2: 25000000
StreamCount: 1
StreamNames: {'Spikes 1'}
StreamInfo: {[1x1 struct]}
SamplesPerSegment: 2500
TriggerStreamID: [-1 -1]
TimeWindow: [1x1 struct]
softwareversion: '3.8.2.0'
TotalChannels: 64
sweepStopTime: 2300
MEA tools extension of matlab for MEA data analysis. I first create the
variable “D” from a mcd file and save it in the workspace. Then, I use
the datastream summary function in display function and matlab return
“there is currently no MCRack
file open in your workspace, please choose a suitable file” whereas D
is open in the
workspace. Moreover when I try opening the mcd file directly from
datastream summary the following message appears :
" ??? Undefined function or variable 'datastrm'.
Error in ==> C:\MATLAB6p5\toolbox\meatools\mcssummaryctrl.m
On line 25 ==> evalin('base', ['global D; D=datastrm(''' fullfile(datapath, datafile) ''');']);
Error in ==> C:\MATLAB6p5\toolbox\meatools\dstream_sum_fig.m
On line 262 ==> mcssummaryctrl('showDinfo', 'dsfh', h0);
??? Error while evaluating uimenu Callback. "
Does anyone have a explanation or a solution to my problem? Thank you.
Here are the information of D delivered by array editor :
filename:
'test.mcd'
fid: -1
BitFlipRemoveFactor: 0
meatype: '8x8'
version: '2.4.9'
filesize: 187249
id: 0
DataType: ''
NChannels: 0
NChannels2: 55
ChannelNames: ''
ChannelNames2: {{55x1 cell}}
HardwareChannelNames: ''
HardwareChannelNames2: {{55x1 cell}}
MicrovoltsPerAD: 1
MicrovoltsPerAD2: 0.0114
MicrosecondsPerTick: 40
ZeroADValue: 2048
ZeroADValue2: 32768
ChannelID: 0
ChannelID2: {[55x1 double]}
HardwareChannelID: 0
HardwareChannelID2: {[55x1 double]}
sorterleft: [1x128 double]
sorterright: [1x128 double]
mea8x8ChannelNames: {1x64 cell}
total_window_ticks: 25000
offset_to_data: 0
recordingdate: 7.3407e+005
recordingStopDate: 7.3407e+005
sweepStartTime: 0
sweepStartPointer: 0
windowTicksPos: 0
triggerChannel: -1
spikeSize: 0
ticks_pre_event: 0
maxSpkPerSegmPerChanl: 0
nSpikesPerSegement: 0
nSpkPerSegPerChanl: 0
HeaderVersion: 10
fileaccess: 'ole'
MillisamplesPerSecond: 25000000
MillisamplesPerSecond2: 25000000
StreamCount: 1
StreamNames: {'Spikes 1'}
StreamInfo: {[1x1 struct]}
SamplesPerSegment: 2500
TriggerStreamID: [-1 -1]
TimeWindow: [1x1 struct]
softwareversion: '3.8.2.0'
TotalChannels: 64
sweepStopTime: 2300
ludovic- Posts : 1
Join date : 2009-11-24
Re: MEA Tools problem
Have you tried:
global D
However the support for MeaTools has timed out. See: http://material.brainworks.uni-freiburg.de/research/meatools/
There are alternative solutions for Matlab now:
See: http://www.find.bccn.uni-freiburg.de/
Or: http://sigtool.sourceforge.net/
Both use the Neuroshare interface. Direct Neuroshare commands in Matlab could be also an alternative.
Jens
global D
However the support for MeaTools has timed out. See: http://material.brainworks.uni-freiburg.de/research/meatools/
There are alternative solutions for Matlab now:
See: http://www.find.bccn.uni-freiburg.de/
Or: http://sigtool.sourceforge.net/
Both use the Neuroshare interface. Direct Neuroshare commands in Matlab could be also an alternative.
Jens
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